First Round
- Diamondbacks
- Royals
- Mariners
- Nationals
- Brewers
- Blue Jays
- Rockies
-
Devil Rays - Wade Townsend
- Mets
- Tigers
- Pirates
- Reds
- Orioles
- Indians
- White Sox
- Marlins
- Yankees (from Phillies for Type B Jon Lieber)
- Padres
- Rangers
- Cubs
- Athletics
- Marlins (from Giants for Type A Armando Benitez)
- Red Sox (from Angels for Type A Orlando Cabrera)
- Astros
- Twins
- Red Sox (from Dodgers for Type A Derek Lowe)
- Braves
- Cardinals (from Red Sox for Type A Edgar Renteria)
- Marlins (from Yankees for Type A Carl Pavano)
- Cardinals
- Diamondbacks (for Type A Richie Sexson)
- Rockies (for Type A Vinny Castilla)
- Indians (for Type A Omar Vizquel)
- Marlins (for Benitez)
- Padres (for Type A David Wells)
- Athletics (for Type A Damian Miller)
- Angels (for Type A Troy Percival)
- Astros (for Type A Carlos Beltran)
- Twins (for Type A Corey Koskie)
- Dodgers (for Type A Adrian Beltre)
- Braves (for Type A Jaret Wright)
- Red Sox (for Type A Pedro Martinez)
- Cardinals (for Renteria)
- Marlins (for Pavano)
- Red Sox (for Cabrera)
- Cardinals (for Type A Mike Matheny)
- Red Sox (for Lowe)
- Orioles (for failure to sign Wade Townsend)